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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946240.1_cds_XP_016488469.1_79103
CDS Infomation

[gene=LOC107808457] [db_xref=GeneID:107808457] [protein=ribosomal RNA small subunit methyltransferase NEP1-like] [protein_id=XP_016488469.1] [location=complement(join(104457..104536,105186..105243,105322..105404,105492..105602,105702..105846,113201..113293,113498..113749))] [gbkey=CDS]
Sequence

ATGGTGCGAGCGTACAAAGTAAAAGGGGAAAAGAGGAAAAAGAAAGGAGAGAATTATGAT
AAGGAAGAAATAGAGGAACCTTTGGAAGAGGAGTCTGCAAAAAGAGCGAGAACAGAAGCA
GACAGTGAGGCAGCTGAACGAATTGTAGATTTACTGGCTGGTATTCCGGTTGTTTCAACT
GATCAAAGCACCAAACCTGGTATTATTTTCATCATCGAAAGAGCTTCTCTGGAAATTGCT
AAAATTGGAAAGACTTACCAACTTCTCAACTCAGATGAACATTCCAACTTTCTGAAGAAG
AATAATCGAAACCCTTCTGATTATCGACCTGATATTGCTTATCAGGCAATGCTTTCAATT
TTAGATAGCCGAGTGAATAAAGCTGGGAGATTAAAAGCTTTGTATGTGAAGACTGAGAAA
GGTGTCCTATTTGAAGTAAAACCTCATGTTCGTATCCCTAGGTCGTTTAAACGATTTGCT
GGCATTATGTTGCAGCTGCTACAAAAGTGGAGCATAACTGCTCTTGGTAAGCGAGAGAAA
CTGTTACGTGTTATAGAAAACCCTGTTTCAAAGTACCTACCCATTGACTGTCGGAAGATA
GGCTTCTCTCATAGTTCTGAGAAGCTGGTGGATATTCAGGAATATGTTAATGGCATCAAC
AAGGACATGAACCTTGTTTTTGTGGTTGGGGCAATGGCCCACGGGAAAATTGATAAAGAT
TATGTCGAAGATTATCTATCGATTTCTGATTATCCATTGAGTGCTGCATACTGCATATCC
ATGATCACAAATGCTGTGGAGCGCAAATGGAAGATTTTGTAG

Peptide Sequence

PEP ID

XP_016488469.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Nicotiana tabacum]
Sequence

MVRAYKVKGEKRKKKGENYDKEEIEEPLEEESAKRARTEADSEAAERIVDLLAGIPVVST
DQSTKPGIIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNNRNPSDYRPDIAYQAMLSI
LDSRVNKAGRLKALYVKTEKGVLFEVKPHVRIPRSFKRFAGIMLQLLQKWSITALGKREK
LLRVIENPVSKYLPIDCRKIGFSHSSEKLVDIQEYVNGINKDMNLVFVVGAMAHGKIDKD
YVEDYLSISDYPLSAAYCISMITNAVERKWKIL

Transcript Sequence

Gene sequence data has not been registered.